Expression data from high-fat diet feeded WT and LIGHT Tg mice
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(Redirected from GSE6903)
| PubMed ID: | 17431181 |
|---|---|
| Contact: | Yugang Wang
|
| Species: | Mus musculus |
| Platform: | Affymetrix GeneChip Mouse Genome 430 2.0 Array |
| Number of Samples: | 6 |
| Date Range: | 10/08/2005 - 05/17/2006 |
| Experiment Quality: | 93.82 21.18 % |
| Link to Repository: | GSE6903 |
| Original Intensity Data: | Download |
| Clean Intensity Data: | Download |
| Original PLIER Data: | Download |
| Clean PLIER Data: | Download |
| Clean CEL Files: | |
| Data Rank: | 
|
effect of over-expression LIGHT on T cells for the liver gene expression
We used microarrays to detail the global programme of gene expression underlying WT and LIGHT Tg liver
Design: mice were selected at 4-8 wks old after 2 weeks HFD feeding for RNA extraction and hybridization on Affymetrix microarrays. The total liver were used.
Type: genetic difference
Contents |
[edit] Contributors
- Yugang Wang
- Yang X Fu
- Jame C Lo
- Alexei Tumannov
[edit] Protocols
[edit] References
[edit] Links
GEO Accession for this experiment: GSE6903. (Public on Aug 03 2007)
PubMed abstract: 17431181
RAW data: tar file.
[edit] Analysis
 Before Normalization |
 After Normalization & Cleaning |
[edit] Samples/Quality Control
| Sample | Date Scanned | Source Link | Probe Variance Data | Artifact Mask | Quality Score |
|---|---|---|---|---|---|
| WT78 | 10/08/2005 13:19:50 | GSM159279 | 
| 
| 88.7259 63.99 % |
| WT30 | 05/17/2006 12:43:22 | GSM159280 | 
| 
| 92.1900 0.23 % |
| WT31 | 05/17/2006 12:24:52 | GSM159281 | 
| 
| 98.0080 0.01 % |
| Tg77 | 10/08/2005 13:29:23 | GSM159282 | 
| 
| 93.0974 62.80 % |
| Tg34 | 05/17/2006 12:52:32 | GSM159283 | 
| 
| 92.6904 0.04 % |
| Tg35 | 05/17/2006 12:34:04 | GSM159284 | 
| 
| 98.1906 0.00 % |
